Browse of TCMCG007C20165 protein

CDS

Accession Number	TCMCG007C20165
gbkey	CDS
Protein Id	XP_009134086.1
Location	complement(join(13118453..13118698,13118792..13118886,13118972..13119109,13119175..13119292,13119380..13119434,13119633..13119711,13119775..13119869,13119952..13120000,13120080..13120238,13120379..13120475,13120561..13120704,13120778..13120930,13121024..13121072,13121150..13121247,13121317..13121472,13121562..13121922,13122027..13122097,13122275..13122358,13122438..13122599,13122685..13122831,13122903..13123132,13123231..13123564))
Gene	LOC103858471
GeneID	103858471
Organism	Brassica rapa

Protein

Length	1039aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009135838.3
Definition	putative transcription elongation factor SPT5 homolog 1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Transcription elongation factor Spt5
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15172        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003677        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006351        [VIEW IN EMBL-EBI] GO:0006354        [VIEW IN EMBL-EBI] GO:0006355        [VIEW IN EMBL-EBI] GO:0006357        [VIEW IN EMBL-EBI] GO:0006366        [VIEW IN EMBL-EBI] GO:0006368        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008023        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009058        [VIEW IN EMBL-EBI] GO:0009059        [VIEW IN EMBL-EBI] GO:0009889        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0010468        [VIEW IN EMBL-EBI] GO:0010556        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0018130        [VIEW IN EMBL-EBI] GO:0019219        [VIEW IN EMBL-EBI] GO:0019222        [VIEW IN EMBL-EBI] GO:0019438        [VIEW IN EMBL-EBI] GO:0031323        [VIEW IN EMBL-EBI] GO:0031326        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032044        [VIEW IN EMBL-EBI] GO:0032774        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034645        [VIEW IN EMBL-EBI] GO:0034654        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044249        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044271        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044451        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0051171        [VIEW IN EMBL-EBI] GO:0051252        [VIEW IN EMBL-EBI] GO:0060255        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0080090        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:0097659        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901362        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1901576        [VIEW IN EMBL-EBI] GO:1903506        [VIEW IN EMBL-EBI] GO:2000112        [VIEW IN EMBL-EBI] GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCCGCGTCACAGAGGGGAAGAGGATGATGTAGACGAAGACTACGATGGAATGGAATTAGAGGAGGAGGAGGAAGAGGACGAAGGAAGAAGCCGTGGCGGCGGCTCGAGGCAGAAGAGAGGAAGATCGAGTTTTTTCGATGATTACGCGGAGGAGGATTCCGAGGAAGAGGAGGACGATGACGATGATGAAGATTACGGCAGCCGCCGAGGAAAAGGAGGTGGAGGTGGAGCAGCTAAGAGAAAAAAGTCATCCGCTGCTATGTTCGTAGACGACATCGCGGACCAGGTTGATGATGATGATGAAGAAGGAGACGAAGAAGATGGAGAAGATGGATTCATAGTGGATACTGGAACGGATCTTCCGGATGAGCGTGTTGATAGACGGAGGTATCACGACCGCGGATTTGACGAAAACGATGAGGATGTGGACGATCTGGAGAGGAGAATTCAGGAGAGGTTCTCTAGGCCTCAGGAGGATTATGATGAAGAAGCTACAGATGTGGAGCAACAAGCTCTTTTGCCTTCTGTCCGTGATCCAAAGCTCTGGATGGTCAAGTGTGCGATTGGCCGTGAAAGGGAGGTTGCGGTGTGTCTTATGCAAAAATACATAGACCGAGGATCGGATTTGCAGATCAGATCTGTTGTTGCACTCGACCATCTTAAAAACTATATATATGTTGAAGCAGACAAGGAAGCTCACGTCAAAGAGGCAATCAAGGGAATGAGGAATATATATGCTAATCAGAAGATCTTACTTGTCCCCATTAGAGAAATGACAGATGTCCTCTCTGTTGAAAGCAAAGCAATTGATCTTTCTCGGGATACCTGGGTTAGAATGAAAATCGGGACGTACAAAGGTGATCTTGCTAAGGTGGTTGATGTTGATAATGTGCGTCAGAGGGTTACTGTCAAGTTAATTCCAAGAATTGATCTGCAGGCTCTAGCCTCTAAGCTGGACGGAAGAGAAGTTGCGAAGAAAAAAGCCTTTGTTCCACCTCCACGTTTCATGAACATTGATGAAGCTAGGGAATTGCACATACGTGTTGAGCGTCGGCGTGATCCCATGACCGGTGACTACTTTGAAAACATTGGTGGTATGCTTTTCAAAGATGGCTTCATGTACAAAACAGTATCGTTGAAGTCCATCATTGCTCAGAACGTTACACCAACTTTTGACGAGCTTGAAAAATTCAACAAACCAAGTGAAAACGGGGAGAGCGGCGACTTTGGTGGTCTGTCGACTTTATTTGCAAACAGAAAGAAAGGTCATTTCATGAAGGGTGATGCAGTTATCGTTATTAAGGGGGATCTCAAAAACTTGAAAGGTTGGGTTGAGAAAGTGGATGAAGACAACGTTCTTATCAGATCAGGATTGAAAGGTCTCCCTGATCCTCTCGCTGTAAATGAGAAAGAGCTCTGCAAATACTTCGAGCCTGGAAATCACGTGAAGGTTGTTTCTGGGACACATGAAGGAGCAACAGGCATGGTGGTCAAAGTTGATCAACATGTGCTTATCCTTCTGTCTGACACGACCAAAGAACATGTCCGCGTGTTTGCTGATCATGTTGTTGAGAGCTCAGAAGTGACAACTGGTGTTACCAAAATCGGGCAATATGAACTTCATGATCTTGTGCTTCTGGATAACCTCACTTTTGGAGTAACTATACGGCTAGAGAATGAAGCTTTTCAGGTTCTTAAAGGGAATCCTGACAGACCAGAGGTTGCTCTTGTCAAACTCAGAGAAATCAAATGCAAGCTTGATAGGAAAATTAGTGTTCAAGATCGCTACAAAAATGTCATTTCTGTGGGTGATGATGTCAGAATCGTCGAAGGTCCTAGCAAAGGTAAACAAGGTCCCGTGAGGCATATTTACAAAGGGGTCTTATTTATATATGATCGCCATCACCTTGAGCATGCCGGATTCATCTGCGCTAAATGCACATCATGCGTTGTTGTTGGTGGATCACGTTCTGGTGCTAATAGAAGTGGTGGTGATTCCTTATCAAGATTTAGCAATTTCAAGGCTCCTGCCCCAGTGCCTCCATCTCCAAGACGATTTCAACGCGGAGGCATGGGATACAACGCAAGAGGAAGGGGCAGGGGTGGAAGAGGAGGGAGAGACGATTCTTTGTTGGGCACTACTGTTAAAATCCGTCTAGGACCTTTCAAGGGATATAGGGGACCTGTAGTAGAAGTGAAAGGAGATTCAGTGCGTGTTGAACTTGAGATGAAGATTGTGACAGTTGATCGAAATGCAATATCAGATAATGTGGCTGTGACAACACCGTCTCGAGATACATCTCGGTATAGCATGGGAAGTGAAACACCTATGCATCCTTCACGGACTCCACTTCATCCTTATATGACTCCTATGCGGGACTCTGGAGCTACACCGATCCATGATGGAATGAGGACACCCATGCGTGATAGAGCGTGGAATCCTTACACGCCTATGAGTCCACCTAGGGATAACTGGGAAGAAGGGAACCCAGGATCTTGGGGAACGAGTCCTAACTATCAACCGGGAAGTCCTCCTTCAAGGGCATATGAAGCACCAACTCCTGGGTCAGGATGGGCTAGTACACCCGGTGGTAGTTACTCAGATGCGGGGACACCTAGAGATAGTGGTTCAGCCTATGCTAATGCCCCAAGTCCTTACCTTCCATCTACACCTGGACAACCTATGACACCAAGCTCGGCTTCATACTTACCTGGAACTCCCGGAGGACAACCAATGACTCCTGGAACTGGCCTCGATGTCATGTCTCCTGTTATAGGTGGAGATGCTGAAGCATGGTTCATGCCTGATATATTGGTTGAGATACACAAGGCTGGAGAAGACAGCGATGTGGGCGTCATCCGAGATGTCTCGGATGGAACGTGTAAAGTGTCTCTCGGGTCGAACGGTGAAGGTGACACTATAATGGCTCTCCCGGGCGAACTGGAGATAGTTCCTCCGAGGAAGAATGATCGTGTGAAAATCGTTGGCGGCCAATATCGTGGTTCTATAGGTAAGCTGATCGGAATCGACGGATCAGATGGTATCGTTAAGATTGAGGATAATCTCGACGTCAAGATTCTGGATCTGGCCATACTAGCCAAGTTTGTTCAACCGTGA

Protein:   MPRHRGEEDDVDEDYDGMELEEEEEEDEGRSRGGGSRQKRGRSSFFDDYAEEDSEEEEDDDDDEDYGSRRGKGGGGGAAKRKKSSAAMFVDDIADQVDDDDEEGDEEDGEDGFIVDTGTDLPDERVDRRRYHDRGFDENDEDVDDLERRIQERFSRPQEDYDEEATDVEQQALLPSVRDPKLWMVKCAIGREREVAVCLMQKYIDRGSDLQIRSVVALDHLKNYIYVEADKEAHVKEAIKGMRNIYANQKILLVPIREMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALASKLDGREVAKKKAFVPPPRFMNIDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFMYKTVSLKSIIAQNVTPTFDELEKFNKPSENGESGDFGGLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEDNVLIRSGLKGLPDPLAVNEKELCKYFEPGNHVKVVSGTHEGATGMVVKVDQHVLILLSDTTKEHVRVFADHVVESSEVTTGVTKIGQYELHDLVLLDNLTFGVTIRLENEAFQVLKGNPDRPEVALVKLREIKCKLDRKISVQDRYKNVISVGDDVRIVEGPSKGKQGPVRHIYKGVLFIYDRHHLEHAGFICAKCTSCVVVGGSRSGANRSGGDSLSRFSNFKAPAPVPPSPRRFQRGGMGYNARGRGRGGRGGRDDSLLGTTVKIRLGPFKGYRGPVVEVKGDSVRVELEMKIVTVDRNAISDNVAVTTPSRDTSRYSMGSETPMHPSRTPLHPYMTPMRDSGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEEGNPGSWGTSPNYQPGSPPSRAYEAPTPGSGWASTPGGSYSDAGTPRDSGSAYANAPSPYLPSTPGQPMTPSSASYLPGTPGGQPMTPGTGLDVMSPVIGGDAEAWFMPDILVEIHKAGEDSDVGVIRDVSDGTCKVSLGSNGEGDTIMALPGELEIVPPRKNDRVKIVGGQYRGSIGKLIGIDGSDGIVKIEDNLDVKILDLAILAKFVQP